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IDP1437 protein (Zea mays) - STRING interaction network
"IDP1437" - 40S ribosomal protein S19 mitochondrial in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDP143740S ribosomal protein S19 mitochondrial; Belongs to the universal ribosomal protein uS19 family (144 aa)    
Predicted Functional Partners:
pza02939
Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family (314 aa)
   
 
  0.977
rps12-B
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity) (75 aa)
 
 
  0.944
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
 
 
  0.930
RPS12
Ribosomal protein S12, mitochondrial; Protein S12 is involved in the translation initiation step (125 aa)
   
 
  0.929
GRMZM5G877040_P01
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family (159 aa)
   
 
  0.929
GRMZM2G060054_P03
Disease resistance protein RPM1 (1898 aa)
   
 
  0.922
GRMZM2G047476_P03
IQ-domain 20 (455 aa)
   
 
  0.922
GRMZM5G853305_P01
50S ribosomal protein L16, chloroplastic ; Belongs to the universal ribosomal protein uL16 family (120 aa)
 
 
  0.920
GRMZM2G125151_P01
Uncharacterized protein (686 aa)
   
 
  0.917
GRMZM2G464846_P01
annotation not available (67 aa)
   
 
  0.915
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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