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GRMZM2G146847_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G146847_P01" - RING-H2 finger protein ATL80 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G146847_P01RING-H2 finger protein ATL80 (173 aa)    
Predicted Functional Partners:
100285881
Polygalacturonase (426 aa)
           
  0.506
GRMZM2G536644_P01
Molecular chaperone Hsp40/DnaJ family protein (488 aa)
           
  0.493
GRMZM2G054076_P01
Chaperone protein dnaJ (567 aa)
           
  0.493
100284565
Vegetative storage protein 2 (153 aa)
           
  0.487
100282109
Stem glycoprotein (216 aa)
           
  0.487
100273245
Cysteine proteinase inhibitor; Multicystatin; Multicystatin isoform 1; Multicystatin isoform 2; Uncharacterized protein ; Belongs to the cystatin family. Phytocystatin subfamily (176 aa)
           
  0.487
cl13598_-2
Vignain ; Belongs to the peptidase C1 family (484 aa)
           
  0.483
GRMZM2G028862_P01
Vignain; Belongs to the peptidase C1 family (232 aa)
           
  0.483
100279297
UDP-Glycosyltransferase superfamily protein (417 aa)
       
 
  0.471
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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