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STRINGSTRING
100217137 protein (Zea mays) - STRING interaction network
"100217137" - Pseudouridine synthase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100217137Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (386 aa)    
Predicted Functional Partners:
FHA2
DNA damage signaling and repair protein (557 aa)
     
   
  0.873
100217116
tRNA pseudouridine synthase (335 aa)
   
   
  0.826
100193430
Putative tRNA pseudouridine synthase (516 aa)
   
   
  0.826
100280567
tRNA pseudouridine synthase (443 aa)
   
   
  0.826
GRMZM2G315902_P01
annotation not available (1132 aa)
   
   
  0.822
100276448
Cytoplasmic protein of eukaryotic origin (38.3 kD) (306 aa)
   
     
  0.820
100279238
tRNA pseudouridine synthase (486 aa)
   
   
  0.814
100283773
Pseudouridine synthase family protein (565 aa)
   
   
  0.813
GRMZM2G009091_P03
Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1’ of nucleotide 34 to detach the guanine base from the RNA, formi [...] (364 aa)
   
   
  0.749
100158231
Isopentenyl transferase1; Belongs to the IPP transferase family (470 aa)
   
   
  0.744
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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