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STRINGSTRING
tms5 protein (Zea mays) - STRING interaction network
"tms5" - Nuclear ribonuclease Z in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tms5Nuclear ribonuclease Z; Uncharacterized protein (302 aa)    
Predicted Functional Partners:
103635013
tRNAse Z4 (930 aa)
         
  0.924
103643670
annotation not available (921 aa)
     
        0.834
100501489
annotation not available (939 aa)
     
        0.832
mybr15
annotation not available (1134 aa)
     
   
  0.831
100216810
P-loop containing nucleoside triphosphate hydrolase superfamily protein (785 aa)
     
        0.831
GRMZM2G405499_P01
annotation not available (539 aa)
     
   
  0.805
GRMZM2G097977_P01
annotation not available (608 aa)
     
   
  0.805
100191510
Periodic tryptophan protein 2 (885 aa)
     
        0.804
crp11
Ribonuclease Z chloroplastic (492 aa)
   
   
 
0.802
100501347
Binding (853 aa)
     
        0.797
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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