STRINGSTRING
Zm.21240 protein (Zea mays) - STRING interaction network
"Zm.21240" - Putative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21240Putative uncharacterized protein (319 aa)    
Predicted Functional Partners:
HB45
Hypothetical protein LOC100193486 (296 aa)
       
   
0.880
HB11
Hypothetical protein LOC100194027 (333 aa)
       
 
0.839
hb129
Homeobox-leucine zipper protein HOX27-like (448 aa)
       
 
0.839
Zm.96997
DNA binding protein (135 aa)
           
  0.721
TCP20
Hypothetical protein LOC100274570 (315 aa)
           
  0.721
ZYP1
ZYP1 protein (1065 aa)
           
  0.720
RBR3
Retinoblastoma-related protein 3 (ZmRBR3); Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity) (1010 aa)
       
 
  0.622
GRMZM2G016997_P01
Hypothetical protein LOC100217179 (1002 aa)
       
 
  0.622
RR7
Response regulator 7 (242 aa)
       
 
  0.571
Zm.143030
Ameiotic 1 (782 aa)
           
  0.559
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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