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Zm.79558 protein (Zea mays) - STRING interaction network
"Zm.79558" - LOC100279301 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.79558LOC100279301 (TIDP2949), mRNA (555 aa)    
Predicted Functional Partners:
ereb162
Hypothetical protein LOC100273875 (406 aa)
     
   
  0.728
Zm.79053
Thioredoxin H5-like (128 aa)
           
  0.721
AY109692
Ubiquitin-conjugating enzyme E2-17 kDa (148 aa)
           
  0.721
gst41
Glutathione transferase41 (307 aa)
           
  0.721
Zm.26993
Ethylene-responsive transcription factor 8-like (220 aa)
           
  0.721
Zm.156612
Putative uncharacterized protein (374 aa)
     
 
  0.718
Zm.133852
Ethylene-responsive transcription factor ERF109-like (263 aa)
           
  0.710
GRMZM2G146280_P01
Hypothetical protein LOC100272812 (449 aa)
     
 
  0.663
Zm.96884
WD-repeat domain phosphoinositide-interacting protein 3 (442 aa)
     
 
  0.663
GRMZM2G069177_P01
Putative uncharacterized protein (417 aa)
     
 
  0.663
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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