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STRINGSTRING
100217249 protein (Zea mays) - STRING interaction network
"100217249" - RING/U-box superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100217249RING/U-box superfamily protein; RING finger protein 5; Uncharacterized protein (230 aa)    
Predicted Functional Partners:
100193229
Peroxisome assembly factor 1; Uncharacterized protein (337 aa)
     
 
  0.791
103643490
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (394 aa)
     
 
  0.755
100191299
Peroxisome biogenesis protein 7 (319 aa)
     
   
  0.656
GRMZM2G102502_P01
Peroxisome biogenesis protein 19-1; Peroxisomal biogenesis factor 19 (252 aa)
       
 
  0.628
100282867
Peroxisomal biogenesis factor 19; Uncharacterized protein (253 aa)
       
 
  0.628
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
     
   
  0.536
103639307
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (735 aa)
           
  0.530
100282952
Uncharacterized protein; Vesicle-associated membrane protein 725 ; Belongs to the synaptobrevin family (220 aa)
     
        0.527
100192535
Protein phosphatase 2C isoform epsilon (284 aa)
     
        0.495
GRMZM2G304121_P01
Eukaryotic translation initiation factor 6 (253 aa)
           
  0.447
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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