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cl10007_1b protein (Zea mays) - STRING interaction network
"cl10007_1b" - Hypothetical protein LOC100191146 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl10007_1bHypothetical protein LOC100191146 (254 aa)    
Predicted Functional Partners:
TIDP3245
Hypothetical protein LOC100191289 (311 aa)
   
 
 
  0.568
GRMZM2G082931_P01
Glycine-rich RNA-binding protein 7 (316 aa)
   
          0.527
Zm.81380
Uncharacterized protein (295 aa)
   
          0.516
Zm.136970
LOC100282309 (295 aa)
   
          0.501
GRMZM2G070259_P01
RNA binding protein (257 aa)
   
 
 
  0.488
pco079325
Hypothetical protein LOC100192580 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (287 aa)
   
          0.474
GRMZM2G456186_P01
Heterogeneous nuclear ribonucleoprotein 1-like (278 aa)
   
     
  0.472
GRMZM2G108919_P01
Polyadenylate-binding protein 2 (212 aa)
   
          0.457
GRMZM2G030259_P02
Polyadenylate-binding protein 2-like (228 aa)
   
          0.406
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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