STRINGSTRING
Hcf106C protein (Zea mays) - STRING interaction network
"Hcf106C" - HCF106C precursor protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hcf106CHCF106C precursor protein (238 aa)    
Predicted Functional Partners:
umc1995
Hypothetical protein LOC100275815 (103 aa)
           
  0.721
Zm.1424
Hypothetical protein LOC100275815 (LOC100275815), mRNA (103 aa)
           
  0.721
Zm.96126
Myb2 (925 aa)
           
  0.721
Zm.30543
Hypothetical protein LOC100382705 (426 aa)
     
   
  0.531
Zm.118112
Inner membrane protein ALBINO3 (455 aa)
     
   
  0.441
pco148010
LOC100285911 (459 aa)
     
   
  0.441
GRMZM2G006006_P01
Hypothetical protein LOC100273361 (278 aa)
   
        0.425
GRMZM2G051767_P01
Hypothetical protein LOC100274170 (289 aa)
   
        0.421
Zm.126512
Uncharacterized protein (545 aa)
     
   
  0.404
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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