• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100194327 protein (Zea mays) - STRING interaction network
"100194327" - Histone H2A in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100194327Histone H2A (135 aa)    
Predicted Functional Partners:
his2b4
Histone H2B.4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
 
  0.853
103639304
Histone H2B (148 aa)
     
 
  0.853
100192792
Histone H2B (150 aa)
     
 
  0.853
umc1268
Histone H2B (137 aa)
     
 
  0.853
trh1
Histone H2B (148 aa)
     
 
  0.853
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
       
 
  0.846
103635303
Putative histone chaperone ASF1A (193 aa)
     
 
  0.838
100283736
Putative histone chaperone ASF1A; Anti-silencing protein 1; Uncharacterized protein (191 aa)
     
 
  0.838
crd101
Chromdomain-containing protein CRD101; Uncharacterized protein (380 aa)
     
 
  0.835
his2b5
Histone H2B.5; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (154 aa)
     
 
  0.829
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]