STRINGSTRING
GRMZM2G152111_P06 protein (Zea mays) - STRING interaction network
"GRMZM2G152111_P06" - Transformer-2 protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G152111_P06Transformer-2 protein (283 aa)    
Predicted Functional Partners:
ms45
Hypothetical protein LOC100273898 (323 aa)
       
    0.772
GRMZM2G100620_P01
Hypothetical protein LOC100272589 (317 aa)
       
    0.772
Zm.83356
LOC100282036 (216 aa)
   
  0.735
fha15
Hypothetical protein LOC100192588 (539 aa)
       
      0.701
RS2Z35
Hypothetical protein LOC100193414 (314 aa)
     
    0.694
GRMZM5G874478_P01
Glycine-rich RNA-binding protein 8 (205 aa)
   
 
    0.689
GRMZM5G841101_P01
Hypothetical protein LOC100217196 (287 aa)
   
 
    0.689
pco077498
Hypothetical protein LOC100382959 (103 aa)
   
 
    0.687
Zm.76158
Ribonucleoprotein A (268 aa)
   
 
    0.686
RAB15
Glycine-rich RNA-binding, abscisic acid-inducible protein ; Possibly has a role in RNA transcription or processing during stress (159 aa)
   
 
    0.685
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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