STRINGSTRING
expB4 protein (Zea mays) - STRING interaction network
"expB4" - Beta-expansin 4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
expB4Beta-expansin 4 (308 aa)    
Predicted Functional Partners:
umc1162
LOC100283627 (239 aa)
     
        0.771
Zm.669
Alpha-expansin 5 (294 aa)
     
   
  0.754
GRMZM2G021427_P01
expansin-B3-like (267 aa)
     
     
0.728
GRMZM2G127695_P01
Hypothetical protein LOC100272690 (238 aa)
     
        0.687
xet1
Xyloglucan endotransglycosylase homolog1 (394 aa)
           
  0.621
GRMZM2G047384_P02
Hypothetical protein LOC100191724 (377 aa)
     
        0.601
Zm.5871
LOC100285599 (145 aa)
     
   
  0.600
gpm470
LOC100281790 (203 aa)
     
        0.584
Zm.96997
DNA binding protein (135 aa)
     
        0.548
GRMZM2G148374_P01
Hypothetical protein LOC100383904 (951 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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