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STRINGSTRING
umc1509 protein (Zea mays) - STRING interaction network
"umc1509" - Patatin in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1509Patatin; Lipolytic acyl hydrolase (LAH) (410 aa)    
Predicted Functional Partners:
103652814
Hevein-like preproprotein; Uncharacterized protein; Win2 (150 aa)
         
  0.571
gpm68
Expansin-A20 (265 aa)
           
  0.506
100383432
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family (1142 aa)
           
  0.467
GRMZM2G315902_P01
annotation not available (1132 aa)
     
   
  0.466
100191333
Patatin; Lipolytic acyl hydrolase (LAH) (396 aa)
     
   
  0.458
pco131370
ATP-dependent Clp protease proteolytic subunit ; Belongs to the peptidase S14 family (289 aa)
   
     
  0.434
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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