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GRMZM2G154721_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G154721_P01" - Septin and tuftelin-interacting protein 1 homolog 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G154721_P01Septin and tuftelin-interacting protein 1 homolog 1 (520 aa)    
Predicted Functional Partners:
GRMZM2G057394_P02
ATP-dependent RNA helicase DDX23; Uncharacterized protein ; Belongs to the DEAD box helicase family (758 aa)
     
 
  0.903
pco124238
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 (721 aa)
     
 
  0.880
GRMZM2G157016_P01
Uncharacterized protein (314 aa)
     
 
  0.880
100282531
Pre-mRNA-splicing factor ATP-dependent RNA helicase; Putative RNA helicase family protein (722 aa)
     
 
  0.880
100217215
Pre-mRNA-splicing factor 3 (861 aa)
     
 
  0.858
GRMZM2G122185_P01
annotation not available (425 aa)
     
 
  0.855
103643760
annotation not available (769 aa)
     
 
  0.855
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.846
GRMZM2G125151_P01
Uncharacterized protein (686 aa)
     
 
  0.828
GRMZM2G316232_P01
110 kDa U5 small nuclear ribonucleoprotein component CLO; Putative translation elongation/initiation factor family protein (525 aa)
     
 
  0.827
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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