• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
gpm842 protein (Zea mays) - STRING interaction network
"gpm842" - Alpha/beta-Hydrolases superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm842Alpha/beta-Hydrolases superfamily protein; 1,4-beta-D-glucanase; Endo-1,3;1,4-beta-D-glucanase; Uncharacterized protein (241 aa)    
Predicted Functional Partners:
GRMZM2G045404_P01
Protein-tyrosine-phosphatase IBR5 (269 aa)
     
   
  0.617
AY106269
Synaptic glycoprotein SC2 (455 aa)
     
   
  0.549
cl24314_1
Neutral/alkaline non-lysosomal ceramidase (785 aa)
     
   
  0.541
umc1123
annotation not available (203 aa)
 
     
  0.541
100282656
Amino acid carrier (478 aa)
           
  0.539
100501686
Amino acid permease 6 (486 aa)
           
  0.539
AY105589
Amino acid transporter ANT1 (428 aa)
           
  0.527
100191282
3-hydroxybutyryl-CoA dehydrogenase; Uncharacterized protein (299 aa)
   
   
  0.515
GRMZM2G427319_P01
Transmembrane amino acid transporter family protein (532 aa)
           
  0.477
GRMZM2G032304_P01
annotation not available (335 aa)
           
  0.477
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]