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STRINGSTRING
orf417 protein (Zea mays) - STRING interaction network
"orf417" - DNA-directed RNA polymerase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orf417DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (417 aa)    
Predicted Functional Partners:
GRMZM2G388892_P01
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1162 aa)
     
   
  0.813
GRMZM2G310465_P01
annotation not available (514 aa)
     
        0.796
100285018
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (366 aa)
     
 
  0.784
pco116085
rRNA adenine N(6)-methyltransferase; Dimethyladenosine transferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (354 aa)
     
 
  0.784
GRMZM2G064759_P01
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (361 aa)
     
 
  0.784
AC225309.2_FGP003
annotation not available (380 aa)
           
  0.688
103635013
tRNAse Z4 (930 aa)
     
   
  0.646
103643670
annotation not available (921 aa)
     
        0.605
GRMZM2G054765_P01
annotation not available (1272 aa)
     
        0.595
100191510
Periodic tryptophan protein 2 (885 aa)
     
        0.566
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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