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STRINGSTRING
100273971 protein (Zea mays) - STRING interaction network
"100273971" - Nuclear pore complex protein NUP50A in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100273971Nuclear pore complex protein NUP50A (473 aa)    
Predicted Functional Partners:
GRMZM2G459373_P01
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (302 aa)
     
 
  0.953
100193260
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (228 aa)
     
 
  0.953
TIDP3014
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (233 aa)
     
 
  0.953
AC207546.3_FGP004
annotation not available (510 aa)
     
 
  0.920
sumo2
Ubiquitin-like protein SMT3 (110 aa)
     
 
  0.864
100281934
Small ubiquitin-related modifier; SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
     
 
  0.864
SUMO1a
SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
     
 
  0.864
DSUL
Di-SUMO-like protein (250 aa)
     
 
  0.864
GRMZM2G146142_P01
Putative ubiquitin-conjugating enzyme family (381 aa)
     
 
  0.861
tdsgR34C09
annotation not available (612 aa)
     
 
  0.843
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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