STRINGSTRING
PCO147505 protein (Zea mays) - STRING interaction network
"PCO147505" - LOC100283739 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCO147505LOC100283739 (215 aa)    
Predicted Functional Partners:
GRMZM2G121452_P01
Hypothetical protein LOC100192879 (267 aa)
     
   
  0.580
GRMZM2G073077_P02
26S proteasome non-ATPase regulatory subunit 8 (267 aa)
     
   
  0.580
pco145463
LOC100285268 (157 aa)
           
  0.567
GRMZM2G145449_P01
Hypothetical protein LOC100273860 (193 aa)
           
  0.559
pco096955
LOC100283392 (162 aa)
           
  0.559
Zm.9813
LOC100282052 (233 aa)
           
  0.559
his2b2
Histone H2B.2 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (150 aa)
           
  0.530
GRMZM2G141607_P01
Hypothetical protein LOC100191284 (257 aa)
           
  0.529
GRMZM2G139900_P01
Hypothetical protein LOC100193804 (140 aa)
           
  0.465
pco068483
LOC100281932 (174 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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