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Zm.17289 protein (Zea mays) - STRING interaction network
"Zm.17289" - histidyl-tRNA synthetase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.17289histidyl-tRNA synthetase (485 aa)    
Predicted Functional Partners:
pco078161
Hypothetical protein LOC100193869 (339 aa)
     
  0.955
GRMZM2G058138_P01
Hypothetical protein LOC100279728 (339 aa)
     
  0.955
GRMZM2G078756_P01
Hypothetical protein LOC100280209 (447 aa)
   
   
  0.919
GRMZM2G477879_P01
Uncharacterized protein (297 aa)
     
 
  0.906
Zm.3170
Uncharacterized protein (676 aa)
     
 
  0.906
GRMZM2G068862_P01
Hypothetical protein LOC100193253 (401 aa)
   
 
  0.897
Zm.95819
lysyl-tRNA synthetase (675 aa)
     
 
  0.819
GRMZM2G316679_P01
Uncharacterized protein (429 aa)
     
 
  0.819
GRMZM2G164852_P01
Annotation not available (87 aa)
     
 
  0.819
Zm.37982
Probable lysine--tRNA ligase, cytoplasmic (335 aa)
     
 
  0.819
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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