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STRINGSTRING
cenH3 protein (Zea mays) - STRING interaction network
"cenH3" - Centromeric histone H3 isoform 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenH3Centromeric histone H3 isoform 1; Centromeric histone H3 isoform 2; Uncharacterized protein (157 aa)    
Predicted Functional Partners:
103638205
Helicase protein MOM1 (1990 aa)
     
 
  0.895
crd101
Chromdomain-containing protein CRD101; Uncharacterized protein (380 aa)
     
 
  0.883
GRMZM2G107540_P01
annotation not available (137 aa)
     
 
  0.873
103625929
Histone H2A (137 aa)
     
 
  0.873
vim103
Putative RING finger U-box domain family protein (759 aa)
     
 
  0.870
vim102
Variant in methylation102; Putative RING finger U-box domain family protein (807 aa)
     
 
  0.870
et5
DNA (cytosine-5)-methyltransferase 3; May be involved in the CpXpG methylation and in gene silencing (915 aa)
     
 
  0.863
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
     
 
  0.862
hag101
GCN5 protein; Histone acetyl transferase; Histone acetyltransferase; Uncharacterized protein (515 aa)
     
 
  0.858
103635303
Putative histone chaperone ASF1A (193 aa)
     
 
  0.846
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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