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STRINGSTRING
IDP1614 protein (Zea mays) - STRING interaction network
"IDP1614" - Exosome complex component RRP45B in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDP1614Exosome complex component RRP45B (448 aa)    
Predicted Functional Partners:
rph1
RNase PH-like protein; Exosome complex exonuclease RRP41 isoform 1; Exosome complex exonuclease RRP41 isoform 2; Exosome complex exonuclease RRP41 isoform 3; Exosome complex exonuclease RRP41 isoform 4; Uncharacterized protein (242 aa)
 
 
  0.989
GRMZM2G040555_P01
annotation not available (121 aa)
   
 
  0.978
GRMZM2G355342_P01
annotation not available (241 aa)
   
 
  0.975
100216860
Exosome complex component RRP4-like protein (319 aa)
   
 
  0.975
GRMZM2G150496_P01
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate) (526 aa)
   
 
  0.974
e2f14
Exosome complex exonuclease RRP46-like protein (548 aa)
   
 
  0.971
GRMZM2G116133_P06
3’-5’-exoribonuclease family protein; Exosome complex exonuclease RRP42 (287 aa)
   
 
0.960
100856959
3’-5’-exoribonuclease family protein (287 aa)
   
 
0.960
GRMZM5G854199_P01
Transducin family protein / WD-40 repeat family protein (405 aa)
   
 
  0.958
100282437
Exosome complex exonuclease RRP40; Uncharacterized protein (239 aa)
 
 
  0.952
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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