STRINGSTRING
CCD7 protein (Zea mays) - STRING interaction network
"CCD7" - Carotenoid cleavage dioxygenase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD7Carotenoid cleavage dioxygenase (624 aa)    
Predicted Functional Partners:
CCD8
Carotenoid cleavage dioxygenase (597 aa)
   
 
  0.992
GRMZM2G158175_P01
Uncharacterized protein (216 aa)
         
  0.952
GRMZM2G179564_P01
Annotation not available (89 aa)
           
  0.715
GRMZM2G144273_P01
Putative uncharacterized protein (604 aa)
   
   
  0.646
CRTISO1
Carotenoid isomerase (587 aa)
   
   
  0.580
PSY2
Phytoene synthase2 (402 aa)
           
  0.566
MAX1b
Cytochrome P450 monooxygenase (534 aa)
           
  0.565
MAX1a
Hypothetical protein LOC100273597 (528 aa)
           
  0.565
mc1
Annotation not available (40 aa)
           
  0.564
GRMZM2G405203_P01
Hypothetical protein LOC100381787 (705 aa)
           
  0.557
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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