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Zm.78907 protein (Zea mays) - STRING interaction network
"Zm.78907" - RNA binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.78907RNA binding protein (295 aa)    
Predicted Functional Partners:
GRMZM2G043331_P01
Beta-catenin-like protein 1 (512 aa)
     
 
    0.416
GRMZM2G356894_P01
Hypothetical protein LOC100217127 (928 aa)
     
 
    0.414
cl549_1b
LOC100283416 (382 aa)
     
 
    0.412
GRMZM2G057646_P02
Hypothetical protein LOC100304415 (901 aa)
     
 
    0.403
GRMZM2G478709_P01
pre-mRNA-splicing factor prp45 (LOC100286002), mRNA (609 aa)
     
 
    0.402
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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