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STRINGSTRING
100284105 protein (Zea mays) - STRING interaction network
"100284105" - Reticulon-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100284105Reticulon-like protein (283 aa)    
Predicted Functional Partners:
100193984
GTP cyclohydrolase 1 (475 aa)
       
      0.720
umc2756
LYST-interacting protein 5-like protein (477 aa)
       
      0.720
cl581_1
GTP cyclohydrolase I 1 (476 aa)
       
      0.720
GRMZM2G047178_P01
LYST-interacting protein 5-like protein (559 aa)
       
      0.720
H4C14
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
        0.533
100304310
DNA helicase; Belongs to the MCM family (729 aa)
     
        0.487
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
        0.480
100192887
Transmembrane protein (174 aa)
       
      0.469
GRMZM2G044762_P01
annotation not available (222 aa)
     
        0.461
100191705
Vesicle-associated protein 1-1; Uncharacterized protein; VAP27 (244 aa)
     
 
  0.432
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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