STRINGSTRING
PAL1 protein (Zea mays) - STRING interaction network
"PAL1" - Bifunctional phenylalanine ammonia-lyase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAL1Bifunctional phenylalanine ammonia-lyase; Catalyzes the non-oxidative deamination of L- phenylalanine and L-tyrosine to form trans-cinnamic acid and p- coumaric acid respectively with similar efficiencies. Facilitates the commitment step in phenylpropanoid pathways that produce lignins, coumarins and flavonoids (508 aa)    
Predicted Functional Partners:
GRMZM5G831308_P01
Arginase 1, mitochondrial-like (229 aa)
   
 
  0.736
GRMZM2G174671_P01
Hypothetical protein LOC100272721 (340 aa)
   
 
  0.736
Zm.127546
Formiminotransferase-like (301 aa)
 
   
  0.697
GRMZM2G349536_P01
Uncharacterized protein (301 aa)
 
   
  0.696
GFT1
Hypothetical protein LOC100191169 (326 aa)
 
   
  0.694
pco060491
LOC100283572 (240 aa)
   
 
  0.597
GRMZM2G319465_P03
Putative uncharacterized protein (181 aa)
   
 
  0.597
Zm.85184
Hypothetical protein LOC100277946 (928 aa)
           
  0.526
Zm.80133
Putative uncharacterized protein (717 aa)
           
  0.524
Zm.4019
LOC100280719 (731 aa)
           
  0.524
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (5%) [HD]