STRINGSTRING
Zm.3568 protein (Zea mays) - STRING interaction network
"Zm.3568" - ATFP4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.3568ATFP4 (122 aa)    
Predicted Functional Partners:
GRMZM2G359571_P01
Putative cystatin Fragment (76 aa)
           
  0.720
GRMZM5G815098_P01
Bowman-Birk type trypsin inhibitor (124 aa)
           
  0.712
GRMZM2G108207_P01
Hypothetical protein LOC100194034 (355 aa)
           
  0.630
Zm.81929
Metal ion binding protein (148 aa)
           
  0.569
Zm.21399
Metal ion binding protein (350 aa)
           
  0.569
GRMZM2G028134_P01
Metal ion binding protein (134 aa)
           
  0.569
Zm.16971
Cytokinin oxidase 3 (525 aa)
           
  0.562
pco117356b
LOC100280854 (208 aa)
           
  0.529
GRMZM2G150893_P02
Hypothetical protein LOC100216995 ; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (342 aa)
           
  0.528
GRMZM2G068436_P01
PIT1 (205 aa)
           
  0.527
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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