STRINGSTRING
SBP8 protein (Zea mays) - STRING interaction network
"SBP8" - SBP-domain protein 5 Fragment in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBP8SBP-domain protein 5 Fragment (403 aa)    
Predicted Functional Partners:
cl44325_1
Hypothetical protein LOC100280181 (439 aa)
           
  0.720
Zm.85762
RADIALIS (96 aa)
           
  0.720
GRMZM2G478779_P01
Actin-1 (275 aa)
           
  0.546
AO2
LOC542229 (cl1856_1), mRNA; In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. Involved in the biosynthesis of auxin (916 aa)
           
  0.530
Zm.4361
Hypothetical protein LOC100192530 (399 aa)
           
  0.527
AC211190.4_FGP004
Uncharacterized protein (328 aa)
           
  0.481
GRMZM5G864867_P01
Annotation not available (167 aa)
           
  0.469
GRMZM5G825303_P01
Annotation not available (63 aa)
           
  0.469
GRMZM2G700533_P01
Annotation not available (162 aa)
           
  0.469
GRMZM2G539687_P01
Uncharacterized protein (380 aa)
           
  0.469
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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