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gpm640 protein (Zea mays) - STRING interaction network
"gpm640" - Protein MICRORCHIDIA 7 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm640Protein MICRORCHIDIA 7 (798 aa)    
Predicted Functional Partners:
nfd110
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (651 aa)
     
   
  0.605
IDP257
Nuclear pore complex protein NUP62 (120 aa)
     
   
  0.548
103626876
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 (1236 aa)
     
      0.536
GRMZM2G330024_P01
Putative PHD-finger domain containing protein family (1108 aa)
     
        0.528
541967
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1850 aa)
     
   
  0.502
103654852
Methyl-CpG-binding domain-containing protein 9 (1812 aa)
           
  0.487
103642085
Uncharacterized protein (1211 aa)
           
  0.457
103638205
Helicase protein MOM1 (1990 aa)
     
 
  0.453
100193778
4-coumarate--CoA ligase-like 1 (405 aa)
       
 
  0.449
nactf58
Putative NAC domain transcription factor superfamily protein (241 aa)
       
 
  0.449
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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