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STRINGSTRING
100192544 protein (Zea mays) - STRING interaction network
"100192544" - Transducin/WD40 repeat-like superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100192544Transducin/WD40 repeat-like superfamily protein (457 aa)    
Predicted Functional Partners:
GRMZM2G093490_P01
annotation not available (893 aa)
           
  0.782
pza00271
Rho-N domain-containing protein 1 chloroplastic (348 aa)
           
  0.711
pco102615
SAP-like protein BP-73 (390 aa)
           
  0.711
pco123181a
DNA binding protein isoform 1; DNA binding protein isoform 2 (274 aa)
           
  0.670
GRMZM2G080724_P01
25.3 kDa heat shock protein chloroplastic; Belongs to the small heat shock protein (HSP20) family (252 aa)
           
  0.548
WHY1
Single-stranded DNA-binding protein WHY1, chloroplastic; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs; Belongs to the Whirly family (266 aa)
           
  0.518
NAC79
Pentatricopeptide repeat-containing protein mitochondrial (709 aa)
           
  0.509
nactf1
Putative NAC domain transcription factor superfamily protein (121 aa)
           
  0.497
100282443
ANAC010; Uncharacterized protein (323 aa)
           
  0.497
100275733
NAC87 NAC type transcription factor (319 aa)
           
  0.497
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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