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STRINGSTRING
mTRF22 protein (Zea mays) - STRING interaction network
"mTRF22" - Mitochondrial transcription termination factor family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mTRF22Mitochondrial transcription termination factor family protein (371 aa)    
Predicted Functional Partners:
EMB2219
annotation not available (471 aa)
           
  0.745
mterf24
annotation not available (215 aa)
           
  0.744
100284258
NOL1/NOP2/sun family ; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (271 aa)
           
  0.697
GRMZM2G450863_P01
Uncharacterized protein (1482 aa)
     
      0.671
GRMZM2G088348_P01
annotation not available (347 aa)
     
      0.671
pco148683
50S ribosomal protein L4 (293 aa)
     
      0.573
pco138567b
30S ribosomal protein S1 (401 aa)
     
      0.558
pco086004
Ribosomal protein rpS20; Uncharacterized protein (194 aa)
     
      0.509
100281329
50S ribosomal protein L5 (283 aa)
     
      0.509
100382451
30S ribosomal protein S6 alpha chloroplastic (222 aa)
     
      0.509
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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