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STRINGSTRING
TIDP3245 protein (Zea mays) - STRING interaction network
"TIDP3245" - Glycine-rich RNA-binding protein RZ1C in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIDP3245Glycine-rich RNA-binding protein RZ1C (311 aa)    
Predicted Functional Partners:
tdsgR34C09
annotation not available (612 aa)
     
 
  0.810
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.792
GRMZM2G125151_P01
Uncharacterized protein (686 aa)
     
 
  0.753
GRMZM2G331811_P03
Serine/arginine-rich-splicing factor SR34 (272 aa)
       
 
  0.700
GRMZM2G126665_P01
RNA-binding (RRM/RBD/RNP motifs) family protein (381 aa)
       
      0.673
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.642
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
       
 
  0.634
100272438
Serine/arginine-rich splicing factor SC35 (274 aa)
   
 
 
  0.614
TIDP3152
Serine/arginine-rich splicing factor SC35 (251 aa)
   
 
 
  0.613
100383636
Serine/arginine-rich splicing factor SC35 (246 aa)
   
 
 
  0.613
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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