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541824 protein (Zea mays) - STRING interaction network
"541824" - Casein kinase II subunit beta in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
541824Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (273 aa)    
Predicted Functional Partners:
nfd110
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (651 aa)
     
 
  0.877
cka2
Casein kinase II subunit alpha-2; Uncharacterized protein ; Belongs to the protein kinase superfamily (383 aa)
     
 
  0.867
cka4
Casein kinase II subunit alpha; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site (332 aa)
     
 
  0.854
GRMZM2G154799_P01
annotation not available (220 aa)
     
 
  0.854
ACK2
Casein kinase II subunit alpha; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site (350 aa)
     
 
  0.854
103625865
Casein kinase II subunit alpha-2; Belongs to the protein kinase superfamily (383 aa)
     
 
  0.854
GRMZM2G138774_P01
annotation not available (131 aa)
     
 
  0.854
GRMZM2G112056_P01
annotation not available (139 aa)
     
 
  0.854
GRMZM2G007399_P01
annotation not available (117 aa)
     
 
  0.854
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
     
 
  0.849
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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