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STRINGSTRING
ca5p3 protein (Zea mays) - STRING interaction network
"ca5p3" - CCAAT-HAP5 transcription factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ca5p3CCAAT-HAP5 transcription factor; Nuclear transcription factor Y subunit C-2; Uncharacterized protein (255 aa)    
Predicted Functional Partners:
103654015
Nuclear transcription factor Y subunit B-6 (264 aa)
     
 
  0.964
lec1
LEC1 transcription factor1; Leafy cotyledon1 (278 aa)
     
 
  0.964
pco127516
CCAAT-DR1-transcription factor 12 (262 aa)
     
 
  0.899
CADR16
DNA polymerase epsilon subunit 3; Uncharacterized protein (175 aa)
     
 
  0.886
LOC542390
Nuclear transcription factor Y subunit B; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (178 aa)
     
 
  0.875
caat1
Nuclear transcription factor Y subunit B-8 (180 aa)
     
 
  0.875
cadtfr9
annotation not available (105 aa)
     
 
  0.873
ca3p2
annotation not available (91 aa)
     
 
  0.873
CA3P1
CCAAT-HAP3 transcription factor; Nuclear transcription factor Y subunit B-3; Uncharacterized protein (164 aa)
     
 
  0.852
ca3p4
Nuclear transcription factor Y subunit B-3 (212 aa)
     
 
  0.840
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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