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STRINGSTRING
ckx8b protein (Zea mays) - STRING interaction network
"ckx8b" - Cytokinin oxidase8b in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ckx8bCytokinin oxidase8b (534 aa)    
Predicted Functional Partners:
ipt3B
annotation not available (354 aa)
           
  0.560
cl716_1
Acyl-coenzyme A oxidase 4 peroxisomal (436 aa)
 
     
  0.522
GRMZM5G853854_P04
Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 (399 aa)
 
   
  0.516
100273608
D-2-hydroxyglutarate dehydrogenase mitochondrial (562 aa)
     
   
  0.493
100280465
Ectonucleotide pyrophosphatase/phosphodiesterase 1 (468 aa)
           
  0.489
100191950
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (629 aa)
   
   
  0.470
103642166
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (958 aa)
           
  0.457
ARF4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (936 aa)
           
  0.457
103647183
Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (229 aa)
           
  0.457
TIDP3759
Beta-glucosidase (480 aa)
           
  0.444
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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