STRINGSTRING
Zm.77908 protein (Zea mays) - STRING interaction network
"Zm.77908" - Pectinesterase (EC 3.1.1.11) in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.77908Pectinesterase (EC 3.1.1.11) (349 aa)    
Predicted Functional Partners:
GRMZM2G348602_P01
Uncharacterized protein (313 aa)
 
   
  0.689
GRMZM2G154671_P01
Annotation not available (261 aa)
 
   
  0.683
GRMZM2G139828_P01
Hypothetical protein LOC100191454 (458 aa)
 
   
  0.680
GRMZM2G113815_P01
Polygalacturonase (458 aa)
 
   
  0.679
GRMZM2G130401_P01
Uncharacterized protein (308 aa)
 
   
  0.676
GRMZM2G179444_P01
Probable polygalacturonase (313 aa)
 
   
  0.676
Zm.84641
Probable polygalacturonase (516 aa)
 
   
  0.676
GRMZM2G057296_P01
Putative uncharacterized protein (490 aa)
 
   
  0.675
cl10531_1
Hypothetical protein LOC100272705 (495 aa)
 
   
  0.674
Zm.26648
Polygalacturonase (LOC100285112), mRNA (477 aa)
 
   
  0.673
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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