STRINGSTRING
bHLH22 protein (Zea mays) - STRING interaction network
"bHLH22" - Transcription factor FAMA in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bHLH22Transcription factor FAMA (420 aa)    
Predicted Functional Partners:
bHLH13
Transcription factor bHLH94-like (332 aa)
       
 
0.909
Zm.96901
Hypothetical protein LOC100272406 (358 aa)
       
 
0.903
bhlh134
Hypothetical protein LOC100381462 (336 aa)
       
 
0.884
bhlh35
Hypothetical protein LOC100381478 (368 aa)
       
 
  0.582
pco128421
Hypothetical protein LOC100274388 (431 aa)
       
 
  0.582
GRMZM2G175504_P01
Mitogen-activated protein kinase kinase kinase YODA-like (887 aa)
           
  0.546
GRMZM2G093316_P01
Hypothetical protein LOC100381765 (895 aa)
           
  0.546
Zm.30635
Uncharacterized protein (506 aa)
           
  0.546
GRMZM2G107686_P01
Subtilisin-like protease SDD1 (793 aa)
           
  0.532
RBR3
Retinoblastoma-related protein 3 (ZmRBR3); Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity) (1010 aa)
       
 
  0.527
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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