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cl5549_1a protein (Zea mays) - STRING interaction network
"cl5549_1a" - Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5549_1aPhosphatidylinositol/phosphatidylcholine transfer protein SFH10 (605 aa)    
Predicted Functional Partners:
GRMZM2G139600_P01
Gamma-glutamyltranspeptidase 3 (469 aa)
           
  0.777
pco083622
Transcription factor bHLH69 (170 aa)
           
  0.735
bhlh75
annotation not available (898 aa)
           
  0.735
bHLH88
Uncharacterized protein (471 aa)
           
  0.735
bhlh12
Putative HLH DNA-binding domain superfamily protein (230 aa)
           
  0.735
bhlh87
annotation not available (344 aa)
           
  0.735
bhlh58
annotation not available (304 aa)
           
  0.735
103640286
Expansin-A7 (258 aa)
           
  0.730
103638767
Glucomannan 4-beta-mannosyltransferase 2 (479 aa)
           
  0.699
bhlh10
Putative HLH DNA-binding domain superfamily protein (391 aa)
           
  0.688
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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