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Zm.4940 protein (Zea mays) - STRING interaction network
"Zm.4940" - SUMO-conjugating enzyme SCE1-like in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4940SUMO-conjugating enzyme SCE1-like (160 aa)    
Predicted Functional Partners:
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
  0.984
Zm.124974
UBiQuitin family member (143 aa)
       
  0.984
Zm.147423
Hypothetical protein LOC100278764 (LOC100278764), mRNA (236 aa)
     
  0.982
pco115798
LOC100284284 (333 aa)
     
  0.981
GRMZM2G305196_P01
Ubiquitin-like protein SMT3 (110 aa)
     
  0.979
SUMO1a
LOC100281954 (99 aa)
     
  0.979
GRMZM2G053898_P02
LOC100281954 (99 aa)
     
  0.979
ZmPCNA2
Proliferating cell nuclear antigen2 ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.978
PCNA
Proliferating cell nuclear antigen (PCNA); This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.978
GRMZM5G851029_P02
Annotation not available (173 aa)
     
  0.975
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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