STRINGSTRING
Zm.971 protein (Zea mays) - STRING interaction network
"Zm.971" - Hypothetical protein LOC100193206 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.971Hypothetical protein LOC100193206 (539 aa)    
Predicted Functional Partners:
LOC542103
SET domain protein SDG117 (1601 aa)
   
  0.982
GRMZM2G125432_P01
Uncharacterized protein (1461 aa)
   
  0.982
GRMZM2G416552_P01
Annotation not available (802 aa)
   
  0.980
GRMZM2G475673_P01
Uncharacterized protein (785 aa)
     
  0.974
GRMZM2G095389_P01
Uncharacterized protein (580 aa)
     
  0.973
Zm.22238
Lysine-specific demethylase REF6-like (1142 aa)
       
  0.972
jmj20
Hypothetical protein LOC100381553 (1522 aa)
       
  0.972
AC234160.1_FGP001
Putative uncharacterized protein (572 aa)
     
  0.970
GRMZM2G441045_P03
Annotation not available (249 aa)
     
  0.969
GRMZM2G401721_P01
Uncharacterized protein (525 aa)
     
  0.969
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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