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umc1204 protein (Zea mays) - STRING interaction network
"umc1204" - Alba DNA/RNA-binding protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1204Alba DNA/RNA-binding protein (318 aa)    
Predicted Functional Partners:
100193822
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (191 aa)
     
        0.881
pco099347
T-complex protein 1 subunit epsilon; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (589 aa)
     
        0.843
100272988
T-complex protein 1 subunit epsilon; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
     
        0.843
pco060604
Nucleosome/chromatin assembly factor A; Uncharacterized protein (251 aa)
     
        0.842
cl10007_1b
Glycine-rich RNA-binding protein 3 mitochondrial (254 aa)
     
        0.842
nfa104
Nucleosome/chromatin assembly factor A; Uncharacterized protein (258 aa)
     
        0.842
100284207
Putative glycine-rich protein; Uncharacterized protein (261 aa)
     
        0.842
GRMZM2G066394_P01
annotation not available (106 aa)
     
        0.834
GRMZM2G032419_P01
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (190 aa)
     
        0.834
GRMZM6G790713_P01
annotation not available (159 aa)
     
        0.802
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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