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STRINGSTRING
GRMZM2G164117_P02 protein (Zea mays) - STRING interaction network
"GRMZM2G164117_P02" - F-box protein SKIP28 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G164117_P02F-box protein SKIP28 (227 aa)    
Predicted Functional Partners:
GRMZM2G405203_P01
F-box protein MAX2 (705 aa)
           
  0.698
GRMZM2G393272_P02
Uncharacterized protein (313 aa)
           
  0.698
100275823
annotation not available (98 aa)
     
   
  0.545
GRMZM2G009958_P02
Uncharacterized protein (214 aa)
     
   
  0.545
GRMZM2G089618_P01
Uncharacterized protein (123 aa)
 
            0.538
100272608
Dual specificity protein phosphatase PHS1 (928 aa)
           
  0.403
100191869
Transcription factor GTE1 (346 aa)
           
  0.403
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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