• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100382597 protein (Zea mays) - STRING interaction network
"100382597" - Serine/threonine-protein kinase ATG1c in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100382597Serine/threonine-protein kinase ATG1c (704 aa)    
Predicted Functional Partners:
100275976
Autophagy-related protein 101 (213 aa)
     
  0.992
AI920398
Autophagy-related protein 13a (511 aa)
     
  0.973
atg13a
Autophagy-related protein 13a (536 aa)
     
  0.973
atg13b
Autophagy-related protein 13a (533 aa)
     
  0.973
103654631
Autophagy-related protein 13b (606 aa)
     
  0.973
TIDP2822
Autophagy-related protein 13a (512 aa)
     
  0.973
103634282
annotation not available (743 aa)
     
 
 
0.954
atg18e
Uncharacterized protein (371 aa)
     
 
  0.933
Atg12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
       
 
  0.911
Atg4a
Cysteine protease; Autophagy-related 4 variant 1; Cysteine protease ATG4B; Uncharacterized protein (492 aa)
     
 
  0.887
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]