STRINGSTRING
BCH1 protein (Zea mays) - STRING interaction network
"BCH1" - Beta-carotene hydroxylase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCH1Beta-carotene hydroxylase (309 aa)    
Predicted Functional Partners:
Zm.67287
Zeaxanthin epoxidase ; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin (669 aa)
     
 
  0.973
vde1
Violaxanthin de-epoxidase (446 aa)
         
  0.940
PS1
Hypothetical protein LOC100383002 (490 aa)
         
  0.936
GRMZM2G158175_P01
Uncharacterized protein (216 aa)
         
    0.900
GRMZM2G179564_P01
Annotation not available (89 aa)
           
  0.630
PSY2
Phytoene synthase2 (402 aa)
     
   
  0.582
ZDS1
Zeta-carotene desaturase, chloroplastic/chromoplastic Precursor (EC 1.14.99.30)(Carotene 7,8-desaturase); Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (572 aa)
           
  0.571
hxa103
Hypothetical protein LOC100194167 (565 aa)
           
  0.567
Zm.9943
Cyclase (271 aa)
           
  0.565
GRMZM2G053023_P01
Thioredoxin H-type 5 (133 aa)
           
  0.546
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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