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STRINGSTRING
100280172 protein (Zea mays) - STRING interaction network
"100280172" - Clavaminate synthase-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100280172Clavaminate synthase-like protein (328 aa)    
Predicted Functional Partners:
GRMZM2G114578_P01
Putative AMP-dependent synthetase and ligase superfamily protein (659 aa)
           
  0.697
GRMZM2G070837_P01
Putative AMP-dependent synthetase and ligase superfamily protein (655 aa)
           
  0.697
GRMZM5G856720_P01
Phytanoyl-CoA dioxygenase (156 aa)
           
  0.583
GRMZM2G443111_P01
Uncharacterized protein (156 aa)
           
  0.583
GRMZM2G364369_P01
Uncharacterized protein (503 aa)
           
  0.583
100273407
Phytanoyl-CoA dioxygenase (293 aa)
           
  0.583
GRMZM2G055467_P01
Strictosidine synthase 3; Uncharacterized protein (390 aa)
           
  0.519
GRMZM2G165844_P01
annotation not available (2404 aa)
           
  0.517
103634675
Phytochrome kinase substrate 1 (509 aa)
           
  0.495
GRMZM2G110622_P01
Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity (923 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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