STRINGSTRING
mir3 protein (Zea mays) - STRING interaction network
"mir3" - Cysteine protease 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mir3Cysteine protease 1 (468 aa)    
Predicted Functional Partners:
pco139651
Hypothetical protein LOC100381285 (397 aa)
       
  0.964
GRMZM5G865319_P01
Hypothetical protein LOC100193387 (447 aa)
       
  0.953
GRMZM5G834837_P01
Hypothetical protein LOC100273136 (476 aa)
       
  0.953
GRMZM2G440605_P01
Uncharacterized protein (339 aa)
       
  0.953
hb27
Uncharacterized protein (793 aa)
       
 
  0.777
Zm.114223
Probable E3 ubiquitin-protein ligase LUL2 (400 aa)
       
 
  0.774
GRMZM2G036697_P01
Hypothetical protein LOC100381407 (400 aa)
       
 
  0.774
AY104566
Hypothetical protein LOC100193413 (140 aa)
           
  0.721
Zm.2793
Hypothetical protein LOC100217091 (140 aa)
           
  0.721
aprl2
Adenosine 5’-phosphosulfate reductase 2 (456 aa)
         
  0.673
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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