STRINGSTRING
IDP1453 protein (Zea mays) - STRING interaction network
"IDP1453" - Hypothetical protein LOC100193106 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDP1453Hypothetical protein LOC100193106 (105 aa)    
Predicted Functional Partners:
Zm.156797
Small nuclear ribonucleoprotein E (88 aa)
     
  0.995
GRMZM2G386608_P02
Putative uncharacterized proteinSmall nuclear ribonucleoprotein E ; (177 aa)
     
  0.995
GRMZM2G168252_P01
Small nuclear ribonucleoprotein F ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (86 aa)
     
  0.994
pza03049
Small nuclear ribonucleoprotein F ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (107 aa)
     
  0.993
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
  0.993
AC155610.2_FGP009
Uncharacterized protein (67 aa)
     
  0.991
GRMZM2G416061_P02
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.991
GRMZM2G027571_P02
Small nuclear ribonucleoprotein Sm D1 (115 aa)
     
  0.991
AY110400
LOC100284021 (99 aa)
     
  0.989
AY106137
LOC100282926 (478 aa)
     
  0.989
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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