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STRINGSTRING
cko3 protein (Zea mays) - STRING interaction network
"cko3" - Cytokinin oxidase 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cko3Cytokinin oxidase 3 (525 aa)    
Predicted Functional Partners:
100384509
PHD finger protein MALE MEIOCYTE DEATH 1 (689 aa)
           
  0.702
100191347
Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (255 aa)
   
   
  0.568
CKS
3-deoxy-manno-octulosonate cytidylyltransferase; Catalyzes the production of the sugar nucleotide CMP-3- deoxy-D-manno-octulosonate (CMP-KDO). CTP is the preferred nucleotide donor, and it can partially be replaced with UTP but not with ATP. Activates KDO during the biosynthesis of rhamnogalacturonan II (RG-II), a structurally complex pectic polysaccharide of the primary cell wall (By similarity). RG-II is essential for the cell wall integrity of rapidly growing tissues and pollen tube growth and elongation (By similarity) (298 aa)
           
  0.525
tdsgR94C11
Histidine-containing phosphotransfer protein 4; Uncharacterized protein (153 aa)
     
   
  0.519
GRMZM2G124890_P01
Uncharacterized protein (148 aa)
     
   
  0.518
GRMZM5G853854_P04
Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 (399 aa)
 
   
  0.516
ipt3B
annotation not available (354 aa)
           
  0.504
100273608
D-2-hydroxyglutarate dehydrogenase mitochondrial (562 aa)
     
   
  0.493
GRMZM2G160710_P01
ATFP4 (122 aa)
           
  0.480
100280465
Ectonucleotide pyrophosphatase/phosphodiesterase 1 (468 aa)
           
  0.480
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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