• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
pco101966 protein (Zea mays) - STRING interaction network
"pco101966" - Heterogeneous nuclear ribonucleoprotein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco101966Heterogeneous nuclear ribonucleoprotein 1 (453 aa)    
Predicted Functional Partners:
100273670
Transportin-1 (219 aa)
     
 
  0.784
100381988
Transportin-1 (891 aa)
     
 
  0.784
GRMZM2G312026_P01
Transportin-1 (508 aa)
     
 
  0.784
GRMZM2G444029_P01
Glycine-rich domain-containing protein 1 (626 aa)
           
  0.708
100381658
23-bisphosphoglycerate-independent phosphoglycerate mutase 1 (556 aa)
     
 
  0.650
SR45_1
annotation not available (429 aa)
       
 
  0.611
100285313
annotation not available (226 aa)
     
 
  0.609
SR45_2
Arginine/serine-rich splicing factor SR45_2 transcript II (422 aa)
       
 
  0.605
100273601
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
     
   
  0.585
100381870
Putative SAP DNA-binding domain family protein isoform 1; Putative SAP DNA-binding domain family protein isoform 2 (732 aa)
           
  0.583
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]