STRINGSTRING
GRMZM2G168252_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G168252_P01" - Small nuclear ribonucleoprotein F in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G168252_P01Small nuclear ribonucleoprotein F ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (86 aa)    
Predicted Functional Partners:
Zm.156797
Small nuclear ribonucleoprotein E (88 aa)
     
  0.999
GRMZM2G386608_P02
Putative uncharacterized proteinSmall nuclear ribonucleoprotein E ; (177 aa)
     
  0.999
GRMZM2G083642_P02
Small nuclear ribonucleoprotein G (80 aa)
     
  0.999
Zm.93924
Putative uncharacterized proteinSmall nuclear ribonucleoprotein G ; (80 aa)
     
  0.999
GRMZM2G385031_P01
Annotation not available (248 aa)
     
  0.999
GRMZM2G121482_P01
Annotation not available (124 aa)
     
  0.999
GRMZM2G045640_P01
Annotation not available (103 aa)
     
  0.999
GRMZM2G416061_P02
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.999
GRMZM2G027571_P02
Small nuclear ribonucleoprotein Sm D1 (115 aa)
     
  0.999
GRMZM2G049013_P02
SAD1 (137 aa)
     
  0.998
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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