STRINGSTRING
pco088018 protein (Zea mays) - STRING interaction network
"pco088018" - LOC100284880 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco088018LOC100284880 (404 aa)    
Predicted Functional Partners:
cl9362_1
LOC100283525 (281 aa)
     
        0.937
Zm.118625
Hypothetical protein LOC100194368 (525 aa)
     
 
  0.936
Zm.5801
Hypothetical protein LOC100275802 (415 aa)
     
 
  0.936
GRMZM2G134844_P01
Putative uncharacterized protein (525 aa)
     
 
  0.936
Zm.37903
Uncharacterized protein (452 aa)
     
 
  0.936
GRMZM2G028900_P01
GTP binding protein (596 aa)
     
 
  0.924
gras39
Uncharacterized protein (251 aa)
     
 
  0.897
Zm.122753
Hypothetical protein LOC100274701 (594 aa)
     
 
  0.897
GRMZM2G140602_P01
Hypothetical protein LOC100193077 (592 aa)
     
 
  0.897
TIDP3557
Hypothetical protein LOC100274162 (375 aa)
     
 
  0.897
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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